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#!/bin/sh
STRING=$( cat <<EOF
chrM    57  .   T   C   4848.99 GT:AD:DP:GQ:PL  ./. 1/1:1,149:150:99:4903,439,0 0/0:202,0:202:99:0,541,6030 0/0:249,1:250:99:0,646,7558 0/0:249,1:250:99:0,647,7484 0/0:111,0:111:99:0,304,3346 0/0:171,0:172:99:0,397,4599 0/0:118,0:118:99:0,340,3827 0/0:247,0:247:99:0,650,7312 0/0:218,0:219:99:0,611,6728 0/0:242,0:242:99:0,686,7589 0/0:250,0:250:99:0,689,7599 0/0:144,0:144:99:0,409,4608 0/0:250,0:250:99:0,680,7585 0/0:141,3:144:99:0,321,4233 0/0:71,0:71:99:0,205,2260   0/0:204,0:205:99:0,568,6312 ./. 0/0:191,0:191:99:0,523,5874 0/0:249,0:250:99:0,665,7443 0/0:142,0:143:99:0,340,3991 0/0:218,0:218:99:0,575,6612 0/0:247,0:247:99:0,665,7412 0/0:250,0:250:99:0,692,7768 0/0:250,0:250:99:0,689,7749 0/0:247,2:249:99:0,674,7574
chrM    57  .   T   C   4848.99 GT:AD:DP:GQ:PL  ./. 1/1:1,149:150:99:4903,439,0 0/0:202,0:202:99:0,541,6030 0/0:249,1:250:99:0,646,7558 0/0:249,1:250:99:0,647,7484 0/0:111,0:111:99:0,304,3346 0/0:171,0:172:99:0,397,4599 0/0:118,0:118:99:0,340,3827 0/0:247,0:247:99:0,650,7312 0/0:218,0:219:99:0,611,6728 0/0:242,0:242:99:0,686,7589 0/0:250,0:250:99:0,689,7599 0/0:144,0:144:99:0,409,4608 0/0:250,0:250:99:0,680,7585 0/0:141,3:144:99:0,321,4233 0/0:71,0:71:99:0,205,2260   0/0:204,0:205:99:0,568,6312 ./. 0/0:191,0:191:99:0,523,5874 0/0:249,0:250:99:0,665,7443 0/0:142,0:143:99:0,340,3991 0/0:218,0:218:99:0,575,6612 0/0:247,0:247:99:0,665,7412 0/0:250,0:250:99:0,692,7768 0/0:250,0:250:99:0,689,7749 0/0:247,2:249:99:0,674,7574
chrM    57  .   T   C   4848.99 GT:AD:DP:GQ:PL  1/1:1,149:150:99:4903,439,0 0/0:202,0:202:99:0,541,6030 0/0:249,1:250:99:0,646,7558 0/0:249,1:250:99:0,647,7484 0/0:111,0:111:99:0,304,3346 0/0:171,0:172:99:0,397,4599 0/0:118,0:118:99:0,340,3827 0/0:247,0:247:99:0,650,7312 0/0:218,0:219:99:0,611,6728 0/0:242,0:242:99:0,686,7589 0/0:250,0:250:99:0,689,7599 0/0:144,0:144:99:0,409,4608 0/0:250,0:250:99:0,680,7585 0/0:141,3:144:99:0,321,4233 0/0:71,0:71:99:0,205,2260   0/0:204,0:205:99:0,568,6312 0/0:191,0:191:99:0,523,5874 0/0:249,0:250:99:0,665,7443 0/0:142,0:143:99:0,340,3991 0/0:218,0:218:99:0,575,6612 0/0:247,0:247:99:0,665,7412 0/0:250,0:250:99:0,692,7768 0/0:250,0:250:99:0,689,7749 0/0:247,2:249:99:0,674,7574
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

#!/bin/sh

STRING=$( cat <<EOF
chrM    57  .   T   C   4848.99 GT:AD:DP:GQ:PL  ./. 1/1:1,149:150:99:4903,439,0 0/0:202,0:202:99:0,541,6030 0/0:249,1:250:99:0,646,7558 0/0:249,1:250:99:0,647,7484 0/0:111,0:111:99:0,304,3346 0/0:171,0:172:99:0,397,4599 0/0:118,0:118:99:0,340,3827 0/0:247,0:247:99:0,650,7312 0/0:218,0:219:99:0,611,6728 0/0:242,0:242:99:0,686,7589 0/0:250,0:250:99:0,689,7599 0/0:144,0:144:99:0,409,4608 0/0:250,0:250:99:0,680,7585 0/0:141,3:144:99:0,321,4233 0/0:71,0:71:99:0,205,2260   0/0:204,0:205:99:0,568,6312 ./. 0/0:191,0:191:99:0,523,5874 0/0:249,0:250:99:0,665,7443 0/0:142,0:143:99:0,340,3991 0/0:218,0:218:99:0,575,6612 0/0:247,0:247:99:0,665,7412 0/0:250,0:250:99:0,692,7768 0/0:250,0:250:99:0,689,7749 0/0:247,2:249:99:0,674,7574
chrM    57  .   T   C   4848.99 GT:AD:DP:GQ:PL  ./. 1/1:1,149:150:99:4903,439,0 0/0:202,0:202:99:0,541,6030 0/0:249,1:250:99:0,646,7558 0/0:249,1:250:99:0,647,7484 0/0:111,0:111:99:0,304,3346 0/0:171,0:172:99:0,397,4599 0/0:118,0:118:99:0,340,3827 0/0:247,0:247:99:0,650,7312 0/0:218,0:219:99:0,611,6728 0/0:242,0:242:99:0,686,7589 0/0:250,0:250:99:0,689,7599 0/0:144,0:144:99:0,409,4608 0/0:250,0:250:99:0,680,7585 0/0:141,3:144:99:0,321,4233 0/0:71,0:71:99:0,205,2260   0/0:204,0:205:99:0,568,6312 ./. 0/0:191,0:191:99:0,523,5874 0/0:249,0:250:99:0,665,7443 0/0:142,0:143:99:0,340,3991 0/0:218,0:218:99:0,575,6612 0/0:247,0:247:99:0,665,7412 0/0:250,0:250:99:0,692,7768 0/0:250,0:250:99:0,689,7749 0/0:247,2:249:99:0,674,7574
chrM    57  .   T   C   4848.99 GT:AD:DP:GQ:PL  1/1:1,149:150:99:4903,439,0 0/0:202,0:202:99:0,541,6030 0/0:249,1:250:99:0,646,7558 0/0:249,1:250:99:0,647,7484 0/0:111,0:111:99:0,304,3346 0/0:171,0:172:99:0,397,4599 0/0:118,0:118:99:0,340,3827 0/0:247,0:247:99:0,650,7312 0/0:218,0:219:99:0,611,6728 0/0:242,0:242:99:0,686,7589 0/0:250,0:250:99:0,689,7599 0/0:144,0:144:99:0,409,4608 0/0:250,0:250:99:0,680,7585 0/0:141,3:144:99:0,321,4233 0/0:71,0:71:99:0,205,2260   0/0:204,0:205:99:0,568,6312 0/0:191,0:191:99:0,523,5874 0/0:249,0:250:99:0,665,7443 0/0:142,0:143:99:0,340,3991 0/0:218,0:218:99:0,575,6612 0/0:247,0:247:99:0,665,7412 0/0:250,0:250:99:0,692,7768 0/0:250,0:250:99:0,689,7749 0/0:247,2:249:99:0,674,7574
EOF
)
echo "$STRING" |perl -nE '$count = () = m{\./\.}g; say "Line $. has $count";'

enter input (stdin)

syntax highlight

time limit: 5s 15s

enter your note

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